YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE21161
Organism: Caenorhabditis elegans
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21161.

Description E-value Query
Range
Subject
Range
gi|187032401, gi... - gi|39580735|emb|CAE64121.1| Hypothetical protein CBG08735 [Caenorhabditis briggsae], gi|187032401|em...
gi|157748495 - gi|157748495|ref|XP_001669342.1| Hypothetical protein CBG08735 [Caenorhabditis briggsae AF16]
534.0 [0..1] [281..1]

Back

Predicted Domain #1
Region A:
Residues: [1-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVASVEVTC FHVILGFLMF LLYLLLHQIY YQIKLRRERK VPNTLHQFEN IPGLHTIRTP  60
   61 SHTFFCGAQN YRQSSKNPQI YSQDRLKVQR LLRKLLENPQ IHVPENTVAV CIPTWCSVTG 120
  121 ARFHEFQCTP PAPYCPCPTI LSEFHYTYKM VSARVQATFY HNRRCTCLAG ICIYLRIPNE 180
  181 PWYFGDLPDE LIFDLIGPGV KRFISPRGRR RHSPLLLPPV PSAPEMTSSS EEELEPDDVA 240
  241 TPEDPPAYAT VFGYTRTDLI SRIDEIPPPN YYSLFVNSSK L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle