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View Structure Prediction Details

Protein: CE21145
Organism: Caenorhabditis elegans
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21145.

Description E-value Query
Range
Subject
Range
CE21798 - status:Partially_confirmed UniProt:Q9UAX2 protein_id:AAD14740.1
262.0 [0..1] [197..1]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTILALLL APLATALPPT IIRSPKVTGW GWWSEMESCP PGYFAHGMRI KYERDSGSLD  60
   61 ETGLNAIELA CKNRAVPSSG DTYIKGAEGV FGGWQAYQYC PQGEYVIGFA LQSESWRGGN 120
  121 KDDVAANNFA AYCGRPEAPR RRYSWIQGSV NERGSWTRDQ FCPARQIVCG IIVQIEPAQA 180
  181 PHVDDASLDS VGLKCCDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.221849
Match: 1vmoA
Description: Vitelline membrane outer protein-I (VMO-I)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle