| Protein: | sap-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 253 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sap-1.
| Description | E-value | Query Range |
Subject Range |
|
|
188.0 | [0..1] | [252..245] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MVRLTTELFA ERPQFVNSVN MREINLRGQK IPVIENMGVT RDQFDVIDLT DNDIRKLDNF 60
61 PTFSRLNTLY LHNNRINYIA PDIATKLPNL KTLALTNNNI CELGDIEPLA ECKKLEYVTF 120
121 IGNPITHKDN YRMYMIYKLP TVRVIDFNRV RLTEREAAK
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1a9nA |
| Description: | Splicesomal U2A' protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 5.06869554505412 | bayes_pls_golite062009 | |
| RNA binding | 2.76465666962243 | bayes_pls_golite062009 |
| binding | 1.72514846089552 | bayes_pls_golite062009 |
| structural molecule activity | 1.5631307925072 | bayes_pls_golite062009 |
| mRNA binding | 1.10345530526271 | bayes_pls_golite062009 |
| nucleic acid binding | 0.883701441647125 | bayes_pls_golite062009 |
| protein binding | 0.853548241721519 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.336927935789765 | bayes_pls_golite062009 |
|
Region A: Residues: [160-253] |
1 11 21 31 41 51
| | | | | |
1 KMFKGKSGKK ARDAIQKSVH TEDPSEIEPN ENSSGGGARL TDEDREKIKE AIKNAKSLSE 60
61 VNYLQSILAS GKVPEKGWNR QMDQNGADGE AMES
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 2z7xB |
| Description: | No description for 2z7xB was found. |
