YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE20528
Organism: Caenorhabditis elegans
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20528.

Description E-value Query
Range
Subject
Range
CE20529 - Asparaginase \; Ank repeat status:Partially_confirmed UniProt:Q9U3P0 protein_id:CAB02790.1
210.0 [0..1] [98..1]
gi|157762522 - gi|157762522|ref|XP_001673603.1| Hypothetical protein CBG23394 [Caenorhabditis briggsae AF16]
gi|187021047, gi... - gi|39592184|emb|CAE75404.1| Hypothetical protein CBG23394 [Caenorhabditis briggsae], gi|187021047|em...
188.0 [0..1] [98..1]

Back

Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYSSLTRGF VMRLFQGAAY KPKSAFIKKM SDGTCPPINI RRCSCTSDGL SVSPKKSLTS  60
   61 PIWDRRPSKI LDENHLPKQL LVQHHHEDGA FLRNISATNA FYYETTLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.407 d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
View Download 0.407 d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
View Download 0.361 d.220.1 Metal cation-transporting ATPase, ATP-binding domain N
View Download 0.356 d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
View Download 0.356 d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
View Download 0.353 a.1.1 Globin-like
View Download 0.353 a.1.1 Globin-like
View Download 0.348 c.151.1 Description not found.
View Download 0.337 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.322 d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle