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View Structure Prediction Details

Protein: art-1
Organism: Caenorhabditis elegans
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for art-1.

Description E-value Query
Range
Subject
Range
gi|157750406 - gi|157750406|ref|XP_001678916.1| Hypothetical protein CBG11196 [Caenorhabditis briggsae AF16]
gi|39590267, gi|... - gi|39590267|emb|CAE66005.1| Hypothetical protein CBG11196 [Caenorhabditis briggsae], gi|187030527|em...
249.0 [0..1] [308..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGILEVYDA KRTDNLIITL EGISGSETIK AIKKRIAQKK LKLTEERQAL RVEPKGKPLA  60
   61 DDQKLSDLGL SSQKAVLYVR D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.39794
Match: 2dzjA
Description: No description for 2dzjA was found.

Predicted Domain #2
Region A:
Residues: [82-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGPQIAWKTV FMAEYAGPLF VYPLFYLRPT FIYGQAAVNA TMHPAVQIAF FAWSFHYAKR  60
   61 LFETQFIHRF GNSTMPQFNL VKNCSYYWGF AAFVAYFVNH PLFTPPAFGD LQVYFGLAGF 120
  121 VISEFGNLSI HILLRNLRPA GTRERRIPKP DGNPLSLLFN YVSCPNYTYE VASWIFFSIM 180
  181 VQSLPAIIFT TAGFAQMAIW AQGKHRNYLK EFPDYPKNRK AIVPFVL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.522879
Match: PF02544.7
Description: No description for PF02544.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle