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View Structure Prediction Details

Protein: CE20494
Organism: Caenorhabditis elegans
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20494.

Description E-value Query
Range
Subject
Range
gi|39593022, gi|... - gi|39593022|emb|CAE62636.1| Hypothetical protein CBG06766 [Caenorhabditis briggsae], gi|187034296|em...
125.0 [0..5] [188..2]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYFSLISVI FAIYLNSAEA GKEHIAGACH DPFFLGDTPC DKQWSIRYYM DVPTETCLAF  60
   61 NYTGCGHNWN NFATSQACYE ECLPLDHHKC PAASKIHKTT KGKTVCNDDC DCDAGNYCNI 120
  121 GQAYGHCCEK EFKDKVDNDY NPPCPIGQTI VREKIHGITV QLLGKRCLHN FCPFGSTCFD 180
  181 GNFFAACCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1bikA
Description: X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle