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View Structure Prediction Details

Protein: CE20480
Organism: Caenorhabditis elegans
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20480.

Description E-value Query
Range
Subject
Range
TSAD_ACTP2 - tRNA N6-adenosine threonylcarbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strai...
gi|32035197 - gi|32035197|ref|ZP_00135231.1| COG0533: Metal-dependent proteases with possible chaperone activity [...
TSAD_ACTPJ - tRNA N6-adenosine threonylcarbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain...
TSAD_ACTP7 - tRNA N6-adenosine threonylcarbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain...
361.0 [0..23] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIPKILNNN LVLKRIFCRN YSVKVLGIET SCDDTAVAIV NEKREILSSE RYTERAIQRQ  60
   61 QGGINPSVCA LQHRENLPRL IEKCLNDAGT SPKDLDAVAV TVTPGLVIAL KEGISAAIGF 120
  121 AKKHRLPLIP VHHMRAHALS ILLVDDSVRF PFSAVLLSGG HALISVAEDV EKFKLYGQSV 180
  181 SGSPGECIDK VARQLGDLGS EFDGIHVGAA VEILASRASA DGHLRYPIFL PNVPKANMNF 240
  241 DQIKGSYLNL LERLRKNSET SIDIPDFCAS LQNTVARHIS SKLHIFFESL SEQEKLPKQL 300
  301 VIGGGVAANQ YIFGAISKLS AAHNVTTIKV LLSLCTDNAE MIAYSGLLML VNRSEAIWWR 360
  361 PNDIPDTIYA HARSDIGTDA SSEIIDTPRR KLVTSTIHGT ERIRFRNLDD FKKPKSPKTT 420
  421 E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 2ivnA
Description: No description for 2ivnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle