| Protein: | CE20478 |
| Organism: | Caenorhabditis elegans |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20478.
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..45] | [565..179] |
|
Region A: Residues: [1-454] |
1 11 21 31 41 51
| | | | | |
1 MSKQPIDGPL DAEKKEVTVA VTAAENFEEQ VEEVGKVTPP DGGYGWVVVA ASFLVNMAVD 60
61 GVIYTCGKIL VPIWADQFGS TSVAGAVISI LTGCYYLAGP LASSFVNVFG IRSVAIAGSI 120
121 LATTAFLLSR FASTIWELYL LFGVLGGIGF GCMYLPSIVI LSTYFAKKRS VATGIAVCGS 180
181 GIGTMVFSTI NGPVFDYFGK DVGSFMVYLA AIAISGSLFS LLFAPLKATE HQVKKVAKMV 240
241 RNYEGKPEEP TQRLLEDVRN DLEELNRPGH NADTFYAGNA PVSRSRSNTC SFLGIFLFKK 300
301 IQNCLKFRET IKNRKKLDRK AAESAEAHVV HATEHHTVHH VVKKSKFTKF KESLCSVLDK 360
361 DLLFSPSFMT LAVSGTFTVL SFLVPFVYLA LAMKQKNPDF TDAELSLPVT LIGAFNIMFR 420
421 IGCGMVADHP KMSALQVSNV ATIIAGTSML FVPF
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.818732184064642 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [455-571] |
1 11 21 31 41 51
| | | | | |
1 CTELWHYVVF CIPFSAGVAC FAALRSVICV ELIGVEKLSN AFGILMVFMG IGAVVGGPIA 60
61 AQIKDITGNY DISFYVMGII FAFSGVMTIR LPELKAWEES KKLARAGTEM RVISEAS
|
| Detection Method: | |
| Confidence: | 2.51 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
