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View Structure Prediction Details

Protein: CE20432
Organism: Caenorhabditis elegans
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20432.

Description E-value Query
Range
Subject
Range
gi|157754193 - gi|157754193|ref|XP_001666835.1| Hypothetical protein CBG00370 [Caenorhabditis briggsae AF16]
gi|39585172, gi|... - gi|39585172|emb|CAE57415.1| Hypothetical protein CBG00370 [Caenorhabditis briggsae], gi|187039068|em...
286.0 [0..1] [312..1]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGKGVVDYT REGSILSAEQ RRFYEKNGYL LIRNCVPQYE LNRFRQRFQD ICEKKVKAPE  60
   61 NMTVMKDISI AKSEFKDGEK AITKIQDFAD DPVLFEYCKY PGVVDVVKDL IGNPKSNLMA 120
  121 MHTMLINKPP DNGKLTSRHP MHQDLQYFPF RPADFICCAW TAMEKITRAN GCLVVVPGTH 180
  181 KGVLLPHEYP KWEGGVNKAY HGIQDYDTST PRIHVEMEPG DTVFFHPILI HGSGANRTEG 240
  241 FRKAISCHYA NDDLCRYVNV EGTTQETLAE EIIEIAKKRL TRYGLDPNTV TLDFADIWRV 300
  301 RAREVNGRRS NL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 2a1xA
Description: Human phytanoyl-coa 2-hydroxylase in complex with iron and 2-oxoglutarate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phytanoyl-CoA dioxygenase activity 3.78714791672545 bayes_pls_golite062009
binding 1.11496554603865 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.839768636546836 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009
protein binding 0.323463866258272 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle