| Protein: | efl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for efl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..4] | [340..34] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MEDSYNDMED PGFRQLSDME LQKALEMTKQ SSIKNNLMLG LDNELDFDFD FDEDEDLDQP 60
61 QMGTRADKSL GLLAKRFIRM IQYSPYGRCD LNTAAEALNV RQKRRIYDIT NVLEGIGLIE 120
121 KRSKNMIQWK GGDFML
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [137-264] |
1 11 21 31 41 51
| | | | | |
1 NVKEGKRQSA TTEEEDRMEQ LKAEIEQLNK EEELIEQRQR WLQQSLRNMT ESVENNKLSY 60
61 VLRSQLAEIQ GSDLTIGIQT RVGTQVRLSD PEQVEIHGGP SWCYLKDPSG PLRAAIVSNH 120
121 ELHDFVQR
|
| Detection Method: | |
| Confidence: | 18.154902 |
| Match: | 2azeB |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [265-342] |
1 11 21 31 41 51
| | | | | |
1 ERAKRPGEEH VDADAPDEMM DDSRYRNRRT INDDEMFGFE QKVPAMKHLE PPPASDDYVY 60
61 SSTGDEYRGD SIVDLYGD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
