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View Structure Prediction Details

Protein: fbxb-66
Organism: Caenorhabditis elegans
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxb-66.

Description E-value Query
Range
Subject
Range
fbxb-81 - status:Predicted UniProt:O76691 protein_id:AAC26950.1
168.0 [0..2] [329..3]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFPILLLP QKSLQNVLRI MQPLELIYFS FVSKTCKAHT VDLNLKASRL TIVLKNGEEC  60
   61 AWIEAVFKDG NTVGFEISTE SCADCSEVMY PVLGTYYEDG SYDSSHADTI KVPTIGLAQV 120
  121 IAHFQTIFHK PKISQLYHEN VYICDQMLEI IKTLDFEKIE FWIRTFDYFL ILFSNYTREV 180
  181 DFQI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [185-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HCLRLVTRVI LCRSIRFVDS SDWHLPNVLA SNGTQFKCST PVPIKSINMF LRHWTNGSNP  60
   61 RLECIRISIE AEAPFSEEST 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.142668
Match: PF07735.8
Description: No description for PF07735.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [265-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIEEVLKGIH YQTEPIDSVK TFDPINLYTH NNLCFNEHIL KQTTGIVIRC GYEKKAMVNV  60
   61 KLFETPTESE VLFQMSLIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle