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View Structure Prediction Details

Protein: CE20126
Organism: Caenorhabditis elegans
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20126.

Description E-value Query
Range
Subject
Range
gi|157750144 - gi|157750144|ref|XP_001678785.1| Hypothetical protein CBG04260 [Caenorhabditis briggsae AF16]
gi|39583079, gi|... - gi|39583079|emb|CAE60619.1| Hypothetical protein CBG04260 [Caenorhabditis briggsae], gi|187035866|em...
350.0 [0..1] [208..1]
yop-1 - status:Confirmed UniProt:Q9N4G8 protein_id:AAF36016.1
47.0 [0..51] [192..2]
REEP6_DANRE - Receptor expression-enhancing protein 6 OS=Danio rerio GN=reep6 PE=2 SV=1
46.0 [0..67] [196..5]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQAEVINQE RSFYLENNTA PISLASDVKK SGFLSTLASY LTSNAKSDPK PVIQQKKLMN  60
   61 SWDDVDLVKL NILVCNVLYE PHSYELLFRE IERVFGRRRE HCFYGALGVL LTLVLLNDAV 120
  121 GAITAFMTLI IPTFMTVTAI SSTSSYENPS FLKNHQDFFV RYWTVYAVFV TGESFLSSLI 180
  181 HWDLRLFRLI FMSMCLSTRI PVLAATYGNS DKRLVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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