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View Structure Prediction Details

Protein: CE20119
Organism: Caenorhabditis elegans
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20119.

Description E-value Query
Range
Subject
Range
CE25368 - status:Confirmed UniProt:Q9TVP0 protein_id:CAB63388.1
539.0 [0..1] [513..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRIKHFHEP LDEKEALIDE NCNDVEFVPN FKYQKRKRKF PAVTKLSKYL LLFFGSTVIC  60
   61 LCIFYVTKPQ LNDNFDPNIS DKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIRIYEDIID AMRNRKKSGN FYIKRPETQH VDCGRILNGD KEYLQTVSNN NRIPLIKNSY  60
   61 LNMSCSSLQS RIQPEQFNFE TFKSGSVAFA RIVFEDYEFI EKQVQMSWHP DNVFCFVIDT 120
  121 KSSKEFKMNM KKLDDCFENI IVLPAEHSFD SSGHNQNLGH TECMQSLLQF ENWTYLLLLQ 180
  181 NHDVISKSVY ELARIYEILG GANDVNIGAE IDQRRVPGLK WDAKNLKLFR NESGLDDELL 240
  241 KKPMKIASGY VQASLSRAAV EWLINTVDLT LFINQFDRTK YGGDEQLISS FQVNSQFEMP 300
  301 GHFTDECSKY RYGHDQISRM TQWSGGDVKR CASKTIRHGI CLIGIEDFRA VSEMPVIMFN 360
  361 KMLPSFDYSI IDCTAELLFN RTFLNQTNIK MNEKYYEEMV TVIYHKDHKN PGYHLNCTPS 420
  421 HQYWKYENYL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 99.0
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle