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View Structure Prediction Details

Protein: fbxa-60
Organism: Caenorhabditis elegans
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxa-60.

Description E-value Query
Range
Subject
Range
fbxa-59 - status:Partially_confirmed UniProt:Q9TZ27 protein_id:AAC68933.2
254.0 [0..39] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDITVGITV GIIVGIWLVG KLPWHCLGAT IPIRHKGSSR DIAPKTHQKN LVLPTFLNMP  60
   61 LNIANLVLEK MELKDLLKAR KVCRSLRTAV DKFGLRFDQI NLFLGRDNVE ICMRGTTIRY 120
  121 TTAANGNSNV THNGQKTIIA EENFVERAAK DFKILSKHAR KIDIRNFTEN RRDIIKTFNE 180
  181 IWNTEKCILV KEIRLRHFSF DEVLTNLPWF NAKKLKTIEL NWMKSIDRFE RITQLEQWKN 240
  241 AEVVKIGSKI ASIMIVHFFH FKCFTINHID EFPAQAAIQM RDDLLRRSTF QSCYIIFYKS 300
  301 KTNPIEIAKV FKPDYTGENV FNIEYSNGND KFDISLQEFS YYFLLNMNRS LSV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.988
Match: 1fs2A
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle