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View Structure Prediction Details

Protein: CE19996
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19996.

Description E-value Query
Range
Subject
Range
gi|54636540, gi|... - gi|54636540|gb|EAL25943.1| GA20800 [Drosophila pseudoobscura pseudoobscura], gi|125810117|ref|XP_001...
gi|125810117|ref... - GA20800-PA [Drosophila pseudoobscura], GA20800 [Drosophila pseudoobscura pseudoobscura]
239.0 [0..2] [296..31]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFDRQMKRG QRDWAVRQPD FKAAQYLKEE IGWRVADKVF DLTKFNPLVL DIGCGVGHIA  60
   61 PHLIKENVGK IIQVDMSGGM AQSSAKCEDP EVIVERRTVD EETLDGFHEN QFDLLLTSMS 120
  121 AHWINHLPQW MRKCHDIVKP DCPFIGSMLA EDTLYELRCS LQLAELERIG GVSSHISPFV 180
  181 KTQDIGGLLS SAGFDMITLD SDEIQVGYPN MFALMYDLQL MGESHCTHRR NPTIRRDVLV 240
  241 AAEAIYQSMY SSDGKYPATF KIVSFIGWKP GPNMPKAAKR GSQTVSLKDI GKIVEDPEMM 300
  301 RKMSEKDGVD KKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.221849
Match: 1vl5A
Description: Crystal structure of hypothetical protein (BH2331) from Bacillus halodurans at 1.95 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.612108481676679 bayes_pls_golite062009
methyltransferase activity 0.606225212585352 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.14147363365106 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle