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View Structure Prediction Details

Protein: btb-1
Organism: Caenorhabditis elegans
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for btb-1.

Description E-value Query
Range
Subject
Range
gi|91077018 - gi|91077018|ref|XP_966622.1| PREDICTED: similar to CG9924-PC, isoform C [Tribolium castaneum]
178.0 [0..13] [228..204]
gi|37534558, gi|... - gi|37534558|ref|NP_921581.1| putative speckle-type protein [Oryza sativa (japonica cultivar-group)],...
174.0 [0..4] [220..116]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEVIVCEG ALKHNCWEEY INGLKWGCYR NDNLLQLRFN WSDLKEQGVE GLNLTLIKSQ  60
   61 FLTKSENSDA ILLVEDTKLH VNKAFLSYHS EFFRGLFEFE SEEKQKNEFK ISDVSADDMK 120
  121 AFLAIIHPGN DFPTDSNAKK LLELADRFMV PFVTSSVENH LLKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.39794
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [165-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEIDHVTKIW LADKFQLEKL MNHAISTIET TEKARQVRTS DLFTEMSTEV TQKLLDRVLQ  60
   61 LTTKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 2eqxA
Description: No description for 2eqxA was found.

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