| Protein: | twk-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 452 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-23.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..72] | [450..167] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MSTMCLRSTR NIFYPYFSPI VANKQKLKCN SKCAWMKFRN VLRIALGHLA LYCFVVCYV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-324] |
1 11 21 31 41 51
| | | | | |
1 FAGAWVFHQL EGENETELHD KQREYAMNLK KDVIAKLATT ENVAEINEHL RMFLRNISNL 60
61 HISLDNYLIF NEPTQIVPKR WTFPSSVLFS FTILTTIGYG NVTPHTQQCK VFLMIYGAFG 120
121 IPLFLITIAD LGRFSKTAIM ALVQKVSKRE LKKQSDEHLL REIAEVSPYL DVLLVAGLFV 180
181 VFIAIGSAVI PLWENQLTYF DSVYFSYMSL TTIGLGDIVP RRMDFLLPTL IYITIGLWLT 240
241 TALVEQLADV FRLVHYAGRQ VTNVK
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-452] |
1 11 21 31 41 51
| | | | | |
1 GITVWLGGRR LSMGGLISTV CRRVGMSDNL INQINWDRTV IDALDGKMPP TLPIFPWHFT 60
61 DFLEHDPPLI DLSIDLDQMD GSFYCSKPLS AKKQRRASQM SAPAISWMRP QEEARILDAD 120
121 GTFPNIDA
|
| Detection Method: | |
| Confidence: | 13.30103 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
