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View Structure Prediction Details

Protein: fce-1
Organism: Caenorhabditis elegans
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fce-1.

Description E-value Query
Range
Subject
Range
gi|149023858, gi... - gi|34870924|ref|XP_233483.2| PREDICTED: similar to zinc metalloproteinase, STE24 homolog [Rattus nor...
368.0 [0..6] [439..19]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASCLFKAL LATNWALFLW DQYITFRQYK AHKNAVKRPN EVKELIGEED YKKARDYKID  60
   61 NHLFGFFHSW FNQLLLTAQL IGGYYPFLWY ATASYPLHVA VFLSINSIIE TIIDLPWDLY 120
  121 STFIIEDAHG FNKQTIGFYF VDKIKKMLVG FALTMPIVYG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEWIIVNGGP YFFVYIWLFV SVVVLLLMTI YPTFIAPLFD KYFPLPDGDL KTKIEQLAAS  60
   61 LSYPLTELYV VNGSKRSAHS NAYMYGFWKN KRIVLYDTLL SGAEKEKVHE LYVAAGEKIE 120
  121 ETENDKKRGM NNDEVVAVLG HELGHWALWH TLINLVITEV NLFFSFAVFG YFYKWEALYQ 180
  181 G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [342-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGYHDTPPVI GMMLIFQFVL ALYNQLASIG MVIHSRSAEF GADEFAANLG HGENLIGALT  60
   61 KLGVDNLSMP INDSLYSWCT HTHPPVVERV AAVRAFQAKN K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle