| Protein: | srab-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srab-1.
| Description | E-value | Query Range |
Subject Range |
|
|
192.0 | [0..9] | [310..27] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MPNETDCQVM AEVATSSFLR TSLGMTTLLC ILCVPCTIYS FLAIQKATKL HFNSKCIFHT 60
61 LTIFAFIHMI VRIILHGKDL LNYVGPWMSG CEIFPSRSRC ELRKLYKISA FVVEVTPFVL 120
121 TAERFVATFR ARHYENRYKW CGVLLNIFHI SLALFLFTIQ SSEKVGGDII YYCWMSSTGN 180
181 RYMLNLPIFV IVFSQLITIP ALLYLLRKNE KFREASLQKR STLSQRYQLS QNLQTLTKFR 240
241 IVSTVTWIYV TYNAAATFGV HFFLKSMSSA GQFAIIEIVH CLPLYYLILI FLMVKEDKKP 300
301 HRQFSIKVDH YEPQYFNDLQ KFFDQSFDKV KKTKSVTFVV S
|
| Detection Method: |  |
| Confidence: | 48.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
