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View Structure Prediction Details

Protein: fbxb-82
Organism: Caenorhabditis elegans
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxb-82.

Description E-value Query
Range
Subject
Range
fbxb-81 - status:Predicted UniProt:O76691 protein_id:AAC26950.1
207.0 [0..1] [332..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNGFPILRL PSKPLRSILQ TMKFVELVSI SFTSKVAKRH VKALNMKVSY INMFLSRLTI  60
   61 RLVVNFNGTL PLNFRIPD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNVSEPRKLN KKLNYMKVKE GPIFEETEVF EWKPSGIRFK EIANHVLEIF HKSEFSTLMI  60
   61 SHDYDYKTML QELKDFKIRK LCISSDRIQN SELRRNLLEK YSRQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [184-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELALDYHSL KPQEFHLIVS ISYNNCYLYK VPMKLEDLLV SNIFLMCIDK PCPLKQLCLF  60
   61 LKHWINGSND RLEYLEMNLP ANSTKTQFIS IALNGIDYQL ASTDKEWESA NNGLIKTTVV 120
  121 KTGGFDIRQN DGTIATVTVD ETFQKLRMFV WK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.568636
Match: PF07735.8
Description: No description for PF07735.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle