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View Structure Prediction Details

Protein: fbxb-81
Organism: Caenorhabditis elegans
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxb-81.

Description E-value Query
Range
Subject
Range
fbxb-82 - status:Partially_confirmed UniProt:O76692 protein_id:AAC26951.1
209.0 [0..1] [341..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGFPILRL PSKPLRFLLQ TMKMLDVVSI SFSSKTAKRR VEELNMNVSC IDMYLSTSTI  60
   61 RLVVEFDGTF PLTFQIPDEM 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IESEPRKLNK KLNYMKVKKG PIPEETEIFH WKPSGIRFKE IANHVLEIFH KSEFYMLMIT  60
   61 YDYDYETLLQ ELKDFKICKL FISSNFMQNS KLHRSLLVNY SRQFDKLAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [190-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYHSLKPKVF HSIVSLNYNS FCLERVALKL EDLLVSNISE MRIDIMRIGT RCPSKQLCLF  60
   61 LKHWINGSNN RLEYLVMNLP ANSTENQFLL IALNGIEYQL APT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.744727
Match: PF07735.8
Description: No description for PF07735.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [293-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKEWVFSDNR PIKTIVVEAG GFDIRRNDGT IATVTVDETF QYLRMFSRVQ PLHLEIALAQ  60
   61 TPLSYSYRRS ARLRDAGRHA HRLAEPPAST ILILIKQYLC ITCLHFNSEF LSYEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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