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View Structure Prediction Details

Protein: CE19415
Organism: Caenorhabditis elegans
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19415.

Description E-value Query
Range
Subject
Range
gi|32814707 - gi|32814707|gb|AAP88023.1| cholinephosphate cytidylyl transferase isoform B2 [Aedes aegypti]
186.0 [0..1] [182..145]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFLQPAPLT DDSTVIAKRN LIDYSEKISM ENARNGLSSR PIRVYADGIY DMFHYGHAKQ  60
   61 LLQIKQMFPM VYLIVGVCSD ENTLKFKGPT VQSENERYES VRQCRYVDEV LKDAPWEVSV 120
  121 DFLEEMKMYA EHKAAGRFLE TTRTEGVSTS DSICKIIRDR DELARNYNLE AGVFAVGKTI 180
  181 YFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.09691
Match: 1b6tA
Description: Phosphopantetheine adenylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.84668360172717 bayes_pls_golite062009
ligase activity 0.41353894226697 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 0.1911539125531 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 0.1911539125531 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 0.178548924377401 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle