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View Structure Prediction Details

Protein: ins-26
Organism: Caenorhabditis elegans
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ins-26.

Description E-value Query
Range
Subject
Range
ins-24 - status:Confirmed UniProt:Q9U1P6 protein_id:CAB04964.3
131.0 [0..14] [108..18]
gi|39586988, gi|... - gi|39586988|emb|CAE62923.1| Hypothetical protein CBG07123 [Caenorhabditis briggsae], gi|187033607|em...
gi|157753830 - gi|157753830|ref|XP_001680627.1| Hypothetical protein CBG07123 [Caenorhabditis briggsae AF16]
46.0 [0..34] [103..19]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALVAILCL MALCHAAMLD ELEMQKEVQE FHHMNGMLQE FMNKGLIGNH HHGTKAGLTC  60
   61 GMNIIERVDK LCNGQCTRNY DALVIKSCHR GVSDMEFMVA CCPTMKLFIH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.564 a.77.1 DEATH domain
View Download 0.528 a.77.1 DEATH domain
View Download 0.500 a.77.1 DEATH domain
View Download 0.442 a.28.1 ACP-like
View Download 0.432 a.28.1 ACP-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle