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View Structure Prediction Details

Protein: CE19269
Organism: Caenorhabditis elegans
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19269.

Description E-value Query
Range
Subject
Range
CE22318 - status:Partially_confirmed UniProt:Q9NAE7 protein_id:CAB55059.1
258.0 [0..18] [238..1]
gi|39592987, gi|... - gi|39592987|emb|CAE62601.1| Hypothetical protein CBG06717 [Caenorhabditis briggsae], gi|187034261|em...
254.0 [0..4] [237..2]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSYSLAPAI FCLFFIPMVS ATGHLRLELT ASSHFSLHLS TNSSLQIVEL AMGSTRTLSF  60
   61 HPKDHQETLE IVFSKEFNFP LKYAYKMETD DSSYQTFAFT DIVLLVKSTF KCDAGFNGKS 120
  121 CQEKTTSTTT TTSTKTEIQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.995
Match: 2p28B
Description: No description for 2p28B was found.

Predicted Domain #2
Region A:
Residues: [140-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTTTVLISE VPSTTPIINA AAFQQFDNSN TIMCSVLIIV TATLLVLVLI AFFLLKFQKK  60
   61 NVYIRPGTPN LEKCPMKLED SGFSSPTSPR YTAEPHSLF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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