| Protein: | hmit-1.1 |
| Organism: | Caenorhabditis elegans |
| Length: | 606 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hmit-1.1.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..2] | [438..97] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MVAVAAFSSS GQDKPAHTPK LGLFVYILAA ASVIGGFLFG YDTSVVSAAM LYMPDAPGLK 60
61 PMDTVWQEVL VSISPGMAAV GSLMSGTSSD YIGRRKVILG ASAIFTIGAL VCAASVNKIM 120
121 LLVGRVLLGI AIGFASMIVP VYLGETAPTH VRGMLVAAFA LMISFGQVVA NITGGAFSYI 180
181 DPYNVGWRLM FAFAAVPSII QFVCFMFLPE TPRWLYENGF ETETREVLEK VYNGDKEWVE 240
241 YEMAEIIAFN EDQAKENEKA HASGPVIWRI LKTPHVLKAC FIGSMLQAFQ QLAGINTILY 300
301 YTADIIRSSG ISNNHTTIWI SVLLSLCNFI GPFVPMSLIE KVGRRIIFLF SCGLVVLSLV 360
361 FIGVAFLLVN HDSAATLPAN QYGSNFNSSY PDAKGCMAYS NCDYCVTTDA CGFCHDANTK 420
421 QGYCLPAGFD NPEVYSSTGS CTNSNGSIAN NFKWEKY
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.46605775041083 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
|
Region A: Residues: [458-606] |
1 11 21 31 41 51
| | | | | |
1 YCDTKYTLLP IIACGVYLLT FSSGFTSLPW VLNSEFYPMW ARSTCVAIST TSNWVFNLII 60
61 ALTYLSLTQV IGKYGAFWLY AGLTVIAFIF ILFLVPETKG YSIEEVEMLF MNKKQRREAE 120
121 SRRRETVTEV RSRMNSTVSF GQHNEVHKY
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
