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View Structure Prediction Details

Protein: acdh-11
Organism: Caenorhabditis elegans
Length: 617 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-11.

Description E-value Query
Range
Subject
Range
gi|194562427, gi... - gi|84362930|ref|ZP_00987541.1| COG1960: Acyl-CoA dehydrogenases [Burkholderia dolosa AUO158], gi|254...
491.0 [0..37] [610..4]

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Predicted Domain #1
Region A:
Residues: [1-617]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRIGNAVRM ASSSSANATI TARHTQYSHA KTGGFSQTGP TLHNPYKDDP ILDRTLRRLL  60
   61 PESEYMRVAA DLSKFGDRIT SEVEHLGRQA ELEQPRLEHQ DAWGKRVDKL IVCNEWHKLK 120
  121 QICAEEGVIS IGYEDSVDPF VRRIHQVAKL FLFSPSAGLV SCPMAMTDGA VKTLTSLNLY 180
  181 GKHKLATEAV DRLRSRDPSK AWTSGQWMTE KKGGSDVAGG CDTYAVQIDK DTYRLHGYKW 240
  241 FSSAVDADVA LTLARIVDSD GNALEGSRGL SLFLLKIRDE SGNLNGIQMV RLKNKLGTKQ 300
  301 LPTAELLLDG AIAERIGDQG RGVAGISNML NITRIHNAVA SLGYMRRIIS LARDYSTKRV 360
  361 VFGQTQSKWP LHTTTLAKME VDTRGSMLLL FEAARLLGLS EAGKSSDVEA MMLRLITPVL 420
  421 KLYAGKQAVP MVSEGIECFG GQGYMEDTGL PTLLRDAQVT PIWEGTTNVL SLDVLRVFSG 480
  481 KENILLAFGK RVEQLLGNTK TEDEKLKKSK EAVESALKQL QKLLVKASDS AIQGETRIDS 540
  541 VARHIAFTIA RIYSGALLID HASDSSVANQ SDIEVAYRYC CEQPLIDLRW EWFASERVKA 600
  601 DREIVFDNFT ALEKSKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2uxwA
Description: No description for 2uxwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle