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View Structure Prediction Details

Protein: CE19151
Organism: Caenorhabditis elegans
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19151.

Description E-value Query
Range
Subject
Range
gi|109075965 - gi|109075965|ref|XP_001090345.1| PREDICTED: fibrinogen gamma chain isoform 5 [Macaca mulatta]
332.0 [0..7] [435..14]

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Predicted Domain #1
Region A:
Residues: [1-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTSVFFAF LALSAVADDA SFFKVLIREV DNPAGTLQNG QPCGDFGYLG LGCNVYLQAA  60
   61 VSATGQNVSS SNTLTSTNPI NTQMENRISN LNLVVLDANA GNAHSFNGFD LHILISSDQA 120
  121 ANSIIDDYVI HVDTTQSTGV YSYTHQRDST LSTTISIAWS TNISPPSTTS TPEPTTTEVP 180
  181 FTGSTLPPTT TPKPPMDCSE ISNLTSSGVQ TIYPNGSPVQ VYCDTTSYGT YTVIQSRGAT 240
  241 GENVNFNITY DKYTDIIGTP GKETNFWFGL DNMNHLSGAK PYRLQIDLCC GTLLVAKQIY 300
  301 HSFKVGTAEY GYNLTATADI SGIGLAYSST YTDLGAKFST FDNFTGPLGK DDCDEFQYFD 360
  361 DSGVQSQPYG GWWYGSCGNN LNGFWYPKRN GNCTVPDEVF KNTTMLGINM RTTSGQGYGG 420
  421 YNVDMVSYDR VRMALFTFDS ITINRTDSSF CS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.221849
Match: 1deqC
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle