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View Structure Prediction Details

Protein: CE19136
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19136.

Description E-value Query
Range
Subject
Range
CE34511 - status:Partially_confirmed UniProt:Q9U2B3 protein_id:CAB60388.2
194.0 [0..2] [370..5]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFKLPFTF FRVKFKKNSF KILNLPLVAL TNVINQLDIQ SVSKLSKTSK KMRINIKNAR  60
   61 RKVHKLIIDN HFEYHIDKFH QPLFYQRIIL LETKSDVVSA YSYVANQENM NDYILTMYSV 120
  121 DFWIDWFHSI NNWNKKQRDQ SIFEYRSSKQ LLKFLNCFDG IFTIDHLDLI IDKDVLFGDY 180
  181 QSILNHPIFR KCHYIEIGGR DSNISTEEMQ FLLNKINVNY GMLVRCELLG SMNNEAMLKI 240
  241 PRLDIFTAEY ITLKDLVNMD CEVIKLWRHL FTSQHINQFI HHWMAGAVPK LRKLRLNYFC 300
  301 EPSWVDEILL GVKHSKWDRR RRPQFFCDGL ERVDCADGDD IERDDGLHAT VIFMHDAINF 360
  361 LVWHDKFSLN NNIK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle