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View Structure Prediction Details

Protein: CE18973
Organism: Caenorhabditis elegans
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18973.

Description E-value Query
Range
Subject
Range
gi|28566424 - gi|28566424|gb|AAO43091.1| alpha(1,2)fucosyltransferase [Pithecia irrorata]
305.0 [0..6] [318..37]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIVSRGFSL YFFLLWTFLL VLVVYFYTLL PENEVNGTPV FEERKFISSN FAVSKQLGNN  60
   61 IFELASILGI SRVLHRTPVI FLQNSTYQYM LNRVIQSIPG LLEEFLVLNE TVPDQVVWVD 120
  121 FNRKCCTFEN PQKLKNWKLQ ENEIIYLTGL YYQSFKYFPN MRSELRGFLE TSEKFPTLPK 180
  181 SDNKNYVTCV HIRRSDFFDV GFHVGSEKSI REVIGYIKTN VTLLQDQKVS FVIFGDDINF 240
  241 MRSLIQNQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 2hhcA
Description: No description for 2hhcA was found.

Predicted Domain #2
Region A:
Residues: [250-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNFRFFLFCK IFFFSKAAHS TFGWWMGYLS KGNQVYYADI RGTNDSVYKT GDLKPDDYYL  60
   61 PHWIPVKVEA DIFSYRNFFK KKIKISIGFL LFPLCSNHYH VGSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle