| Protein: | twk-40 |
| Organism: | Caenorhabditis elegans |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-40.
| Description | E-value | Query Range |
Subject Range |
|
|
192.0 | [0..8] | [352..169] |
|
Region A: Residues: [1-393] |
1 11 21 31 41 51
| | | | | |
1 MATWKTYARI ILAHVSLIVL SVVYVGFGAF LFYQLEQPNE VEVRARNIER FNIHKRQMIE 60
61 HLWEMRESGI GQHVVEDLAV KYVDNVTRIL FEAFDTHCIG AKHLRPGGED EDYNWTYMTA 120
121 LFFTTTLLTT IGYGNLTPVT GRGKLLCILY ALFGVPLILI TVADIGKFLS ENIVQLYTWY 180
181 RKLREKCSKQ KYSVISSKDD KNKEGDLNLD HLENYISIPI FLIVAILLSY ITFGAVVLSM 240
241 WEGWDFFSGF YFSFITMTTV GFGDIVPLKR EYYILDLCYI IIGLSITTMC IDLVGIQYIR 300
301 KMHYFGRAIK DARFALVNVG GKMVHVPDLM RYASVLQQKY GQKKTHDTII VKGAYAPKDL 360
361 SKIRFIDFGA LASIESWQSL WSILTGRTQE VHV
|
| Detection Method: |  |
| Confidence: | 39.39794 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
