| Protein: | mdt-29 |
| Organism: | Caenorhabditis elegans |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mdt-29.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..1] | [438..42] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MSGQGPPPSM TPQQQHMLMQ QQQQQQMMRQ QQMQQQQMQQ QRQQQIQQQA QQPYQRARTP 60
61 QMVPQGGSPG GAHLQMHPHL QPQG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-320] |
1 11 21 31 41 51
| | | | | |
1 QMQPRSPLVG AQLQAPSSVP TAANPTTPQM MQQQMGMNQP MSLPPTHVSR PGSVAPPSSV 60
61 PVNLQHTSGA PGLPGSQMEH QYPMHLQPQQ QTLSRPGSQQ SQHIQQPGSI QRPGSVLAPG 120
121 SIPPGGPASQ TGPQSIQVFG PGSVQPPGST QAPSSVQPAS TFNPGSIQAP ASQQPPASVQ 180
181 PPPSAASGST VAGAQSSKEP LKPNEEQIRM VQDPVDLVRN LVQKDLRNSL VEMNKR
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [321-441] |
1 11 21 31 41 51
| | | | | |
1 GAELVRQKQE GEVNEDGKAQ YSRATNDFHA VCDEIDRTLT TVLETAKQLS KLDKVFFDRS 60
61 SRDLDGEVMV NSVQNFVDNT EIVQRMFDDT IGSVTSSMES MRRRQKKWED QHKNDDVEMM 120
121 E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
