YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE18870
Organism: Caenorhabditis elegans
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18870.

Description E-value Query
Range
Subject
Range
gi|83774203 - gi|83774203|dbj|BAE64328.1| unnamed protein product [Aspergillus oryzae]
gi|169781996 - gi|169781996|ref|XP_001825461.1| hypothetical protein [Aspergillus oryzae RIB40]
615.0 [0..1] [522..1]

Back

Predicted Domain #1
Region A:
Residues: [1-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSFSTSSL SVSNSRTRLI SFRETEHGDQ KSSEEWKTST KLEALGSMEG ELAHLLSTCK  60
   61 PETLNHNKTE LSGFRNLFAR FLRAKPTVDW SKIEPLPEGA IRPYKSLGHV VDKELIASQL 120
  121 RKLVVVKLNG GLGTSMGCKG PKSVISVRND LTFLDLTMQQ IQTLNKTYGV DVPLVLMNSF 180
  181 NTNEDTQKVL KKYANVKVSV HTFSQSQYPR INRETLLPIV KSLEADDNEC WYPPGHGNFY 240
  241 EAFHNSGLLD KFLADGKEYC FLSNIDNMGA TVDLSILNFV LNPSPDQTAP EFLMEVTDKT 300
  301 RADVKGGTLI QYEGRLMLLE IAQVPKDYVD EFKSISKFRI FNTNNLWAKL DAMRKIVVEN 360
  361 KLEMEVIVNP KHLDRGLDVI QLETAAGAAI KSFSGAVGVN VPRSRFLPVK KTSDLLLLMS 420
  421 NLYDIDNGSL TLSHQRSFPT TPLVKLGSSF DKVKDYLGRF NGIPDLLELD HLTVSGDVWF 480
  481 GKDVSLKGTV IIIANHGDRI DIPPGSILEN KIVSGNLRIL EH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 2i5kA
Description: No description for 2i5kA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle