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View Structure Prediction Details

Protein: tag-131
Organism: Caenorhabditis elegans
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-131.

Description E-value Query
Range
Subject
Range
NEUFC_CAEBR - Neuferricin homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1
gi|157775333 - gi|157775333|ref|XP_001665732.1| hypothetical protein CBG18095 [Caenorhabditis briggsae AF16]
410.0 [0..1] [326..1]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKNRRRTDD AGLMTKTLAG IAALVFFLSF ICSSYDITVT HVISTIDVIL EESEYYRSAK  60
   61 EWTASSIDAT WNEVSIPSRK AEHIQAINPE VDVAAGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHVFTPEQLH FFDGTRDSKP IYLAILGRVY NVDGKKEYYG PGKSYHHFAG RDATRAFTTG  60
   61 DFQESGLIAT THGLSHDELL SIRDWVSFYD KEYPLVGVVA DLYYDSEGQP TPEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1t0gA
Description: Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [212-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDVLARVEKA NEYRKAQAVE IEVFPPCNSE YNQNGGRVWC STKSGGVERQ WAGVPRKLIE  60
   61 PTTEKFRCAC VKNFGPGVSG AEEVKSSSNR GDLDHPDLEL FPDCSPTSNS CKIVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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