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View Structure Prediction Details

Protein: pms-2
Organism: Caenorhabditis elegans
Length: 77 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for pms-2.

Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNRWRVISK NQYDQNTRVL SFHRRQCSLL FSSVLTPELL KLYFNSTGCC QLVKCNSAVN  60
   61 RQFNRCWFDN YRYPRKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.784 a.4.1 Homeodomain-like
View Download 0.696 a.77.1 DEATH domain
View Download 0.691 a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.676 d.203.1 DsrC, the gamma subunit of dissimilatory sulfite reductase
View Download 0.674 a.4.1 Homeodomain-like
View Download 0.586 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.485 d.58.11 EF-G/eEF-2 domains III and V


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