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View Structure Prediction Details

Protein: CE18785
Organism: Caenorhabditis elegans
Length: 561 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18785.

Description E-value Query
Range
Subject
Range
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
419.0 [0..34] [552..77]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDRGYGGSR SYGGSSGGGS RGGYGGGGRG GGGGGYSGGR GGGYGGGGGG GYGGGGYGGG  60
   61 GRGGGRGGSN GSAGGRLRDV DW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.84
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [83-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAENLTPIEK DFYHENAAVS RREQYEIDQW VSANQVTLEG RGVPRPVFEF NEAPLPGQIH  60
   61 ELLYGKFQKP TVIQSISWPI AMSGRDIISI AKTGSGKTLA FMLPALVHIT KQAHRQRGEG 120
  121 PAVLVLLPTR ELAQQVQEVS IDFCHSLGLK MTCLFGGASK GPQARDLERG VDIVVATPGR 180
  181 LLDFLDNGTT NMKKCSYLVL DEADRMLDMG FEPQIKKIIG QIRPDRQTLM FSATWPKEVR 240
  241 ALASDFQKDA AFLNVGSLEL AANHNITQVV DILEEHAKQA KLMELLNHIM NQKECKTIIF 300
  301 VETKRKADEL TRAMRRDGWP TLCIHGDKNQ GERDWVLQEF KAGKTPIMLA TDVAARGLDV 360
  361 DDIKFVINYD YPNNSEDYVH RIGRTGRSDK KGTAYTFFTH TNASKAKDLL KVLDEAKQTV 420
  421 PQALRDMANR SYGGSNSRGR YGGGGFQKRG YGGNDNFAPK RPRYDNGGYG GGSGGGGRW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.154902
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle