| Protein: | CE18554 |
| Organism: | Caenorhabditis elegans |
| Length: | 706 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18554.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..2] | [662..252] |
|
Region A: Residues: [1-619] |
1 11 21 31 41 51
| | | | | |
1 MTSPTQRRSP SDSSAAEDQR IATTIVRDSG SSKEIEESQA DPCRGAWGNQ IEFLLSTLGM 60
61 AVGLGNIWRF PTRAYNNGGS AFLVPYVACA LLFGLPAVYL EFLLGQYHRT TAPIIFRRFA 120
121 PILQGVGWMA VAVSSLVAIY YIIIIGWSTV YMASIVMGHT SKWNRCGNSW NNAESCVDSG 180
181 LQPLCASFNA TGNETSPVWA NLSSEGRGKF YIYLNTSCYD KVDLEFNKTK MIAATEQYFF 240
241 DYVVKPTDGF LEFSSINFKS FFGMNACWLI VVLILWKGVG YMGKASYVIV TLPYFIIILL 300
301 FFRGITLDGA EDGIYYYLGN PDWSKVFMPA TWGEALKQLC FSLGIGYGGL IGMASFSKPN 360
361 NNCFRDALIV IIGDTMMSLV GGAAVFSTLG FLAKKKGCSV AEVVNDGFSL AFVAFPEALG 420
421 RMPLPELWSF LFFLMLFFLG ISTEVAYVNV FCSSICDQFV NLRKRKWLVA VLWCLVLYVL 480
481 GVVMVTDGGF YWFIMFDEYA AGVSSCCAVT AEVLIVAYVY GRRNQLADMK EMFGESKNKC 540
541 TSWIGQHSPY FGFNWMFVTP VLGSILIVLA SIRQYPYQTD ENKPNMYPLA FDIVGWAVCL 600
601 LPMALVPIFA FCAFVEFKR
|
| Detection Method: |  |
| Confidence: | 44.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [620-706] |
1 11 21 31 41 51
| | | | | |
1 KGHDLRALFM KQRQLKSFGR IYQTMASKDR AKQKILPDRE PWDDAPTGHQ FVASPDFQSS 60
61 SQSTRSERPS ERSNYLNSAA SVHSKTQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
