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View Structure Prediction Details

Protein: CE18466
Organism: Caenorhabditis elegans
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18466.

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
372.0 [0..4] [572..6]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDVSLHWL DYAIFGLSIG LSLSTGVYHA IKSRIILRRG DRTAKEEYLM GGRQLPPLPV  60
   61 ALSLLTTFLS GILMLGVPAE MFQRGAQIWL NFVIGVASSI VTCFVFLPVF HKMKSTCLHE 120
  121 YFIHRYNSIL IRRLFSLLFL LFTIVYMSVV LYAPSVALSP VLQINKWYLV LIFGCTTTLY 180
  181 TCLGGLKAVV WTDSLQAVIM YTGVFTLIYK GLSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [215-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVGGLERVL SIAWDSGRIS ELGRMDWRID QYNSLWINLF SGTIVWLASF GVNQLAIQRY  60
   61 ASLPSLKVAQ SIIIYTLAPF TVLCSIVAFV GFIALAYFYN CNPLETGEVK ESDHITISFA 120
  121 RDILQPTPGL FGLYVSCIMS ATLSTLSSGM NSMAAAIYED FLKNSLDGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [384-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITDTGATRLN KIIVLICGLS STGLAFLAEV LGGSLRICIS VMGAMSGPMV AIFVLALFFP  60
   61 KSGSKSCLIS FFLSNLFCLI ICIANYIQDP YHDLFLPTNT TLEGCNGNSN FTIRMMPTYD 120
  121 AHYGNPDTLY ISRISTYSYA GVGFVLMIII GWIASLFEES DHKVEKIRHL TFSGRNEPWP 180
  181 DTHHEFDHFL KEIK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle