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View Structure Prediction Details

Protein: CE18426
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18426.

Description E-value Query
Range
Subject
Range
sre-33 - 7TM receptor, sre family status:Predicted UniProt:O18175 protein_id:CAB03481.2
192.0 [0..18] [327..28]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTYEDYVCV PYPNNLWWLP IVILQFIVVI AGCFSHFIFV SLVVIPHKFG IYLRMAFGMI  60
   61 STMMLIMLLT STGAFLITLA HGKFIEDCEI SSIHFRKQLL FVHSFGEYFF VACELLGTIE 120
  121 RVISTLNPKF RKSKFFSAVF IVGCIIGMLS AFLYIYLVRI SYDSTLFAIG FGSLTMMEIL 180
  181 NGCIVFSLFY TAKEIYQNQR SAPLHVRYEL FQSYAYCRCA AASFTARVFI IAYVYLKLAG 240
  241 FFGGDMDSGF FYMMNLFINL YCLVYPWTIM LYHRKIKSQI KQVLATKNWF RSKRIKEENT 300
  301 KTLYTIDGRR MNRMSTDDHF NQLNAFWNLS TLPSPTPSKN HA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 2j4yA
Description: No description for 2j4yA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle