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View Structure Prediction Details

Protein: CE18392
Organism: Caenorhabditis elegans
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18392.

Description E-value Query
Range
Subject
Range
CE39373 - WBGene00003582 locus:dcap-2 status:Partially_confirmed SW:O62255 protein_id:CAJ43918.1
394.0 [0..1] [200..580]
gi|187037963, gi... - gi|39587651|emb|CAE58589.1| Hypothetical protein CBG01756 [Caenorhabditis briggsae], gi|187037963|em...
gi|157757671 - gi|157757671|ref|XP_001671179.1| Hypothetical protein CBG01756 [Caenorhabditis briggsae AF16]
340.0 [0..1] [200..538]

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Predicted Domain #1
Region A:
Residues: [1-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSPNHPLPP TSNSPATPTA VLGHLIGKPI QPQAILPQAA TPTALGSAEK PKSSRISLSD  60
   61 NSAFKAISST QKQSIPKATA APPSTEKTRS ASLSGSSQVV GKPARNLFNS VVSPVSSGIQ 120
  121 SIQGDGGAWE DVWFREQLAA TTTAGTSISS LAASNQELAM INREETPIED PYFKQQAYQK 180
  181 AQKAQSLIPA CSQWTNSIKV HNTGKTEVLH RKRGGASICK PAGARCYSNG YIYIIIFCFF 240
  241 WVNFPFENRI FFTKNTKKKT ILDIDYVVGP LSFWMQQFST KSPVSGTGPQ LP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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