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View Structure Prediction Details

Protein: inx-13
Organism: Caenorhabditis elegans
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-13.

Description E-value Query
Range
Subject
Range
gi|39586247, gi|... - gi|39586247|emb|CAE66658.1| Hypothetical protein CBG11995 [Caenorhabditis briggsae], gi|187029834|em...
435.0 [0..1] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFLDAFLKG LHKQGDDDSI DRLNYYWTPM LLVIFALTLS AKQYVGQPIQ CWIPAQFTGA  60
   61 WEQYSENYCF VQNTYFISPD KYIPDSEIDR EG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEIGYYQWVP FILGLQAILF YLPSLFWRLM NFNSGVALKK MLFGAKKADR VDEKARNEAA  60
   61 KSTGAHLYES LTLQSRFAKY TSAFTYGGSY LTYLYLFVKF LYLVQIVFQF IILNNFLGTS 120
  121 YTFWGLGILS DILNGREWEE SGHFPRVTMC DFEVR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [248-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLGNKHRHTV QCVLMINMFN EKVYVFLWFW LVIVGVATFL NLVNWTRKLM FRSARKAHIK  60
   61 SYLQIEDNFS DDNSRNGQIL DKFVDYKLKS DGVFITHLID NNGGSVFSHD VIVDMWDRFL 120
  121 QDEDNRSQKK QPAEFREI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle