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View Structure Prediction Details

Protein: CE18237
Organism: Caenorhabditis elegans
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18237.

Description E-value Query
Range
Subject
Range
CE33877 - status:Confirmed UniProt:Q9XTU3 protein_id:CAB11554.2
303.0 [0..8] [294..43]
gi|157772997 - gi|157772997|ref|XP_001664563.1| hypothetical protein CBG11750 [Caenorhabditis briggsae AF16]
gi|187030044, gi... - gi|39584065|emb|CAE66471.1| Hypothetical protein CBG11750 [Caenorhabditis briggsae], gi|187030044|em...
286.0 [0..8] [294..38]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQHCLLFLL CLGVFRAQGA PTGDDNASSF SDTFVRSHFP IIFASTEAPN ATNCLDKVFT  60
   61 NYELKRHVNV KCDEADGLDR CSGLTLVSHD DKAIIIAFRG TKGVLQLLVE SDEIMYRNKT 120
  121 AWFGGGNVGF YFARSYNLLW NAGMKEDFNT LKHAYPGYEI WVGGHSLGGS MAALASNYLV 180
  181 ANGLATSSNL KMITFGEPRT GDKAFADAHD KMVTYSYRIV HHKDIVPHIP LNGMAEFHHH 240
  241 RNEVWYDNDM LKAVFKECDA QESPFCSDSH LDYEIEDHHR YFGMFISFYG RRNCTGDPSN 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 5tglA
Description: A MODEL FOR INTERFACIAL ACTIVATION IN LIPASES FROM THE STRUCTURE OF A FUNGAL LIPASE-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle