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View Structure Prediction Details

Protein: CE18209
Organism: Caenorhabditis elegans
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18209.

Description E-value Query
Range
Subject
Range
CE27361 - status:Partially_confirmed UniProt:O44671 protein_id:AAB94265.2
374.0 [0..5] [476..18]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNNASLGV FVLFCILFVY IFSRNSFDDQ DQYEKVYIQL PFPEASTLST KRPTTSKSAV  60
   61 ITTQERDSTE TVPNALSPSK EEVQDTAEDE VV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGEPALAYFR KLSGSVNGFS SAGGLKFQIM AAYSYKDHFS ATISVPKQIG SVAYCRYIGV  60
   61 DGKEVAEPVE SRVYPFFVVY CSRRSNATML GITNSKNEPI STENSAKLIH RKFKEYQHNV 120
  121 SFCLAPIYGK E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [224-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKWLHFAELV EHYKLQGVNK FFIYIREIGE YDMKLVKSYV ASGEVEIIEV PATNSDVIAQ  60
   61 QMMAVADCLL RSRTYSKWSI YADIDERLIM TDDRMTINGF LRNVTDESIG SIAFPQRWIM 120
  121 KREQIPPKFT SDAQIIEKMP TRAWHETTSA AMKGHPVCKD QVS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.37
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.117862115002202 bayes_pls_golite062009
catalytic activity 0.075405962065044 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.00643109218840909 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [387-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CWAKDIVHNE KAIRMLVHEV VKFYPGYREW FLDSSIGYIR HYRDVDMQSW EKNNIANLMK  60
   61 FGPFSNTSYP NSLGAKLLKN VLSRLHWVYN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle