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View Structure Prediction Details

Protein: CE18133
Organism: Caenorhabditis elegans
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18133.

Description E-value Query
Range
Subject
Range
KLH20_MOUSE - Kelch-like protein 20 OS=Mus musculus GN=Klhl20 PE=2 SV=2
KLH20_BOVIN - Kelch-like protein 20 OS=Bos taurus GN=KLHL20 PE=2 SV=2
gi|229462963 - gi|229462963|sp|Q9Y2M5.3|KLH20_HUMAN RecName: Full=Kelch-like protein 20; AltName: Full=Kelch-like E...
474.0 [0..7] [530..22]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGQEISDP MDLPSTSHDS ADMFESRKPQ SKYKNSHFAN SVLQQLGGLK NRDVLCDVTL  60
   61 ICGWKRINAH RVVLSACSPY FLSMFTSQMA ECYMREINME EIEPPTLEAL IEFCYTGAIA 120
  121 IDDSNVQDIL PAACLLQIHE VQTACCDYLK KQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [154-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPSNCLGIRA FADTHSCKEL LSSADEFALK NFSRVIGKEE FQMLTVESLT TIIKSDKLNA  60
   61 ASEELVFSAV IQWVRHDISK RKTHLSMLLS HVRLPLCTPK FLVSVVSEEI L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.43
Match: 2eqxA
Description: No description for 2eqxA was found.

Predicted Domain #3
Region A:
Residues: [265-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKSDPASRDL VDEAKNYLLL PVERPNMQGP RTKPRKPLQG SEVLYAVGGW CSGDAIASIE  60
   61 RLDPMKGGTT WKCVAPMGKR RCGVGVAVLE NLLYAVGGHD GQSYLNSIER YDPMTNQWSS 120
  121 DVAPTATCRT SVGVAAFNGS LYAVGGQDGE SCLDVVEKYD PRKNEWAKVA SMGTRRLGVS 180
  181 VSVVNGCIYA VGGSNGPAPL NTVERYDPRV GKWEEVRPML TKRKHLGTAV YDGYIYAVGG 240
  241 RDTTTELNTA EKIQCRKRRM ATGCCHE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.221849
Match: 1zgkA
Description: 1.35 angstrom structure of the Kelch domain of Keap1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle