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View Structure Prediction Details

Protein: CE18091
Organism: Caenorhabditis elegans
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18091.

Description E-value Query
Range
Subject
Range
gi|85115144 - gi|85115144|ref|XP_964817.1| hypothetical protein [Neurospora crassa OR74A]
gi|28926612, gi|... - gi|32418510|ref|XP_329733.1| hypothetical protein [Neurospora crassa], gi|28926612|gb|EAA35581.1| hy...
369.0 [0..1] [314..16]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIKWVVGCL LITCFVQLEA SPGDRSIWYQ ECTQVCISKY NCSTKFGTLD WARGDCFWCR  60
   61 YDCMWDTIGH FDSNFGVVPQ FHGKWPFLAI PLPFGFIIQE PASMIFSLLN LFTVYKMLRR 120
  121 FKKMQNLPNR TMWLVYAHVG MFTWISSSLF HMFDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFTEKMDYFG AYSFVLFALY VSVIFTKQLQ FLGRGGPKYI QILFALVYLN HFMKMMQNFD  60
   61 YGYNMTCCIV FSLITTCLYV HHLYYRKRNL GSLQESDIVL IRLIIWANLS TALEILDFTP 120
  121 VFWIFDSHSL FHLATIPIPI WWSDFLALYY DLDVASGKRS VLKMA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle