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View Structure Prediction Details

Protein: CE18022
Organism: Caenorhabditis elegans
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18022.

Description E-value Query
Range
Subject
Range
gi|109481791 - gi|109481791|ref|XP_001079703.1| PREDICTED: similar to solute carrier family 41, member 2 [Rattus no...
342.0 [0..64] [496..132]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGGGIGDG KKDYQSAVHE GLTTFDQLGI ALEDVGKSMD AETATPGGSL FSRVIFRFRN  60
   61 ENSSLKSRTY DHSNDLVNMS VIPAESSYVL FFQVLFPFAV AGLGMVFAGL VLSIVVTWPL 120
  121 FEEIPEILIL VPALLGLKGN LEMTLASRLS TLANLGHMDS SKQRKDVVIA NLALVQVQAT 180
  181 VVAFLASAFA AALAFIPSGD FDWAHGALMC ASSLATACSA SLVLSLLMVV VIVTSRKYNI 240
  241 NPDNVATPIA ASLGDLTTLT VLAFFGSVFL K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.154902
Match: 2yvxA
Description: No description for 2yvxA was found.

Predicted Domain #2
Region A:
Residues: [272-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHNTESWLNV IVIVLFLLLL PFWIKIANEN EGTQETLYNG WTPVIMSMLI SSAGGFILET  60
   61 AVRRYHSLST YGPVLNGVGG NLAAVQASRL STYFHKAGTV GVLPNEWTVS RFTSVQRAFF 120
  121 SKEWDSRSAR VLLLLVVPGH ICFNFLIQLF TLTSKNNVTP HGPLFTSLYM IAAIIQVVIL 180
  181 LFVCQLLVAL LWKWKIDPDN SVIPYLTALG DLLGTGLLFI VFLTTDHFDP KELTSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.49
Match: 2yvxA
Description: No description for 2yvxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle