| Protein: | lin-54 |
| Organism: | Caenorhabditis elegans |
| Length: | 429 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MNQGEIVYQD DDDYYDESEI YDNYEEGAEF IEVNGQLVPH NPAQQNRPGT SSMIQQHNRS 60
61 MEVNQGLVKD EPIDTSSHRV YVPPPRPVQR KPGPSTPGSS QYTVRNLSNL SGSPSMYDRQ 120
121 PASLPRTVQP MGLEMGNSEQ RKVYIDMKDH VSHIRLKTKK KVFAPGQRKP CNCTK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [176-429] |
1 11 21 31 41 51
| | | | | |
1 SQCLKLYCDC FANGEFCRDC NCKDCHNNIE YDSQRSKAIR QSLERNPNAF KPKIGIARGG 60
61 ITDIERLHQK GCHCKKSGCL KNYCECYEAK VPCTDRCKCK GCQNTETYRM TRYKNSGGAV 120
121 SNTNALMSLT NASSTATPDS GPGSVVTDEH GDDYEDMLLS HKPKVEMDPR RFPWYYMTDE 180
181 VVEAATMCMV AQAEEALNYE KVQTEDEKLI NMEKLVLREF GRCLEQMITN TTELTQDLDA 240
241 APTDDIPGPS TSTS
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1oahA |
| Description: | Cytochrome c nitrite reductase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.69799907067579 | bayes_pls_golite062009 |
