| Protein: | atf-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atf-6.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..1] | [589..1] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MNFDNTVHES NFDDLLHNPN FPPQFDQLEL DSLLYGTDES QESTSSSSFG FSDQNAGFRS 60
61 RDGGSLGDSS SDSSPPLSCA NFTENDQEMW DFGFQSRSPF ENFEQQFGSP YQDDEVIAEP 120
121 TNEFMNARYL REEPAKHLPM QQKRIITILP KQSQPVKRIV SRPIQKVYRV KESPGSQQQT 180
181 YRVVQPLMPS PSQATQRQIK QMYYNEPVQE IHMQPKSGPL VRQVSEEPRY VP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [233-358] |
1 11 21 31 41 51
| | | | | |
1 IAPTVDIKAE PQVFTSEQNR KIRNRMYAQA SRMRKKEADE HMKMNLQELL QENEILRTEN 60
61 AALKQRLAFF EHEEPVVEVP QPFGRNQKKK RIIAAGSVLM MFGLFAVISP FNVDNNLNIN 120
121 NQIMAI
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [359-527] |
1 11 21 31 41 51
| | | | | |
1 SNETSMVARH GRVITYEDSA PVAKIPTQQP IHNYPNSTQN DCDMYKLNAT ETIRVNNDIE 60
61 RWVQVHSFDN VPMKFSGGLL NKEAMRKFNY AQKVKPASVY GPQTLAVQKK SEQAALRSRE 120
121 RTWKQLDLLK TGNNIQLDNE KIQRKRQDID KIASIVRQKG DTLYIMTLQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [528-589] |
1 11 21 31 41 51
| | | | | |
1 DYVLLPSLIK GANSVPKLSL LLPSVPMNGT LQDQYTLLRV DCEVTGTGQL TLSNKQLSYL 60
61 MP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
