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View Structure Prediction Details

Protein: mom-2
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mom-2.

Description E-value Query
Range
Subject
Range
gi|48138880, gi|... - ref|XP_396946.1| similar to wingless [Apis mellifera], gi|110749798|ref|XP_396946.3| PREDICTED: simi...
408.0 [0..8] [362..17]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHINTPVLLA IIYFLVFAPK SADAWWLLSK TDTSSANSGS SPILCKNVPG LTPQQKRMCH  60
   61 ENPNIIKYLI SGLRSALHTC EYTFQREAWN CTLTLPGVGT SPLQIASRES AYVYAISAAG 120
  121 VSHSLARACS KGLIDDCGCG ETPQGSGSVA VSQASS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSSSDFVWAG CSDNVKFGNT FGRKFVDQYD RQHATEPRSQ MNLHNNRVGR RLLVNAMNKE  60
   61 CKCHGVSGSC VTKTCWKVMP KFDEFASRLH QKYQLAKLVT NNDQKLTVRS SPSAGSSGRS 120
  121 ERFARNMDAS SKQMRNELIY LDASPNYCAI DVKDRECGEN CPNICCGRGW RTTREIVDEP 180
  181 CHCQFVWCCE VKCKTCKKLV ERNYCL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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