| Protein: | CE17724 |
| Organism: | Caenorhabditis elegans |
| Length: | 520 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17724.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..26] | [506..3] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MAEERGRPQY RPNCNGLSSY YRERFGSHSP EVYLNLRISG FDDRLEREQI KQYLTQELKK 60
61 YAPFEIKVVK NPEEDERLAY VNFERNDCAR KVRYTLMDRL KSVLGKRVQC DPAGILRDQE 120
121 GKYIPDRFNR AQHGADSKRE GGSGSGNRGR PTKEPSTWRL KQDDDEATRT LFVGNMPSDV 180
181 KEREIRHVFE EHGKVEEVDI KTPINTDAAY AFVMFQTVDQ AIQAKAEEQD RPIRAGGSRM 240
241 KIGYGKSQVS RRLFVG
|
| Detection Method: |  |
| Confidence: | 36.0 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [257-328] |
1 11 21 31 41 51
| | | | | |
1 GLGSWCDKEI LQKAFGEFGF VENIDYDHGQ PYAYVVYENT HTSQEACRSL RGACISKGNH 60
61 PIMVDYAKDL TA
|
| Detection Method: | |
| Confidence: | 29.69897 |
| Match: | 2cjkA |
| Description: | No description for 2cjkA was found. |
|
Region A: Residues: [329-520] |
1 11 21 31 41 51
| | | | | |
1 QPEKQQFMRK RRASKSPVGA SAVRTPPGSP KDVVRNFAEL EEAYAATWSG KMALKKTDYP 60
61 VKFYRVYGAE RLPVKLLRDE DDVPLRLLIT QRLSLSSQNL LFDKLASCSS KELSLGVITG 120
121 KKELSDLQPL VNYFTNKEAA GVVTVPGGIL YIFPFCEFAL KLLAEFTPQV NVFNENCPFL 180
181 LGALAVRAPG TP
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 1ow1A |
| Description: | Crystal structure of the SPOC domain of the human transcriptional corepressor, SHARP. |
Matching Structure (courtesy of the PDB): |
|
