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View Structure Prediction Details

Protein: osm-11
Organism: Caenorhabditis elegans
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for osm-11.

Description E-value Query
Range
Subject
Range
gi|187026822, gi... - gi|39596041|emb|CAE69677.1| Hypothetical protein CBG15929 [Caenorhabditis briggsae], gi|187026822|em...
gi|157767754 - gi|157767754|ref|XP_001667357.1| Hypothetical protein CBG15929 [Caenorhabditis briggsae AF16]
287.0 [0..1] [189..1]
osm-7 - status:Partially_confirmed UniProt:O45750 protein_id:CAB03294.2
242.0 [0..17] [189..84]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFITVAALA IVMVLAQANP ARVRRNEEMS ERYCIKHLDH YNKYCGDNAG PIDRALFGKV  60
   61 AKFCPAYEKH CAVGKAGLVE LPDLGSPLVM PPVLPRGSDF ASLDLPIADE RKPAHIHSSR 120
  121 TAPQTTRLTA AIVATCTPEC TAAHCTDECK CAHTHPKVHQ MCNPPSSAAM AETCQRWYSK 180
  181 CTMFTPVQY

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle